rs33624229 SNP Detail

Summary

• ID
  rs33624229
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:31343139 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TAAAG CAAGTAGGAG CCAAGGAGGC
  R
  GGGGCTTTGC CTACCATACA GGCTC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39558311	mCV22897524	ABI	CRAMUS_MOUSE	f	SNP	G	A	A	G
ss145456799	ENSMUSSNP5326123	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A		G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs33624229					SNP	G	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:31343139 () rs orientation: forward

Symbol	Name	Function Class
Rr330604	regulatory region 330604	1539 bp distal
Rr334775	regulatory region 334775	1062 bp proximal
Rr341219	regulatory region 341219	1739 bp distal
Tff3	trefoil factor 3, intestinal	1141 bp downstream