rs33624744 SNP Detail

Summary

• ID
  rs33624744
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:127902380 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ATGATGTAAA ATAGCCCACA GAACTTTGAA AAAAGTGGAA
  GTCACTGAGG GCTGGTGCCA ACTGATTTCA AAGCGTGTGC CGAGACTGTC CTAGTCCAGG
  Y
  CTGAGGACGT TGGCAGGAAG TTAGGCAGAC CGGCAGAGCA CTGCCAGGCC CACTTAGCCC
  ACATATTTGC CCACTCAAAT TCTCACATGA AATAAATTA                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45301320	mCV23907230	ABI	CRAMUS_MOUSE	f	SNP	C	C	C	T
ss147550410	ENSMUSSNP591100	ENSEMBL	ENSEMBL_Sanger	f	SNP		C		T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs33624744					SNP	C	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:127902380 () rs orientation: forward

Symbol	Name	Function Class
Acoxl	acyl-Coenzyme A oxidase-like	within coordinates
Rr397293	regulatory region 397293	531 bp upstream
Rr397294	regulatory region 397294	1041 bp upstream
Rr564634	regulatory region 564634	390 bp proximal