rs33626606 SNP Detail

Summary

• ID
  rs33626606
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:46539574 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCTTG CCCTCTTCCT CTGTGATAAT
  R
  ATGCTTCCTT GGTCTGCTGT TAGCT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39558812	mCV24476860	ABI	CRAMUS_MOUSE	f	SNP	G	A	A	A
ss145698165	ENSMUSSNP3058857	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs33626606					SNP	G	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:46539574 () rs orientation: forward

Symbol	Name	Function Class
Tssr144833	transcription start site region 144833	868 bp downstream
Tssr144834	transcription start site region 144834	849 bp downstream
Tssr144835	transcription start site region 144835	840 bp downstream
Tssr144836	transcription start site region 144836	818 bp downstream
Tssr144837	transcription start site region 144837	778 bp downstream
Xpo5	exportin 5	within coordinates