rs33627040 SNP Detail

Summary

• ID
  rs33627040
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:48033656 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGGCT GCAGTCTAAT GTCTAAGGCC
  Y
  TGTCTGAACA TAGTGTGAAG AATAG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39559149	mCV22666453	ABI	CRAMUS_MOUSE	f	SNP	C	T	C
ss145708776	ENSMUSSNP3149464	ENSEMBL	ENSEMBL_Sanger	f	SNP	C		C
ss325406497	CHEV_17_47859680	CHEVERUD	SCREENING_POP	f	SNP				T	C
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33627040					SNP	C	T	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:48033656 () rs orientation: forward

Symbol	Name	Function Class
D17Dcr12	DNA Segment, Chr 17, Derry C. Roopenian 12	27 bp distal
D17Mit66	DNA segment, Chr 17, Massachusetts Institute of Technology 66	26 bp distal