rs33627864 SNP Detail

Summary

• ID
  rs33627864
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:86427548 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGTTT TGTTTTTCTG TTGTTTCTTA
  K
  AAAATACCTT TACTAAATTT TAATT                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46298737	mCV24274707	ABI	CRAMUS_MOUSE	f	SNP	G	G	T	T	G
ss136757209	ENSMUSSNP7017759	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	T		G
ss323056645	CHEV_9_86439102	CHEVERUD	SCREENING_POP	f	SNP						G	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33627864					SNP	G	G	T	T	G	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:86427548 () rs orientation: forward

Symbol	Name	Function Class
D9Mit111	DNA segment, Chr 9, Massachusetts Institute of Technology 111	1018 bp proximal
Dop1a	DOP1 leucine zipper like protein A	within coordinates
Gm17530	predicted gene, 17530	1187 bp downstream
Rr211041	regulatory region 211041	1748 bp distal
Tssr86395	transcription start site region 86395	253 bp downstream
Tssr86396	transcription start site region 86396	226 bp downstream