rs33628337 SNP Detail

Summary

• ID
  rs33628337
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:75192460 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TAGAA AGACTCCTCT GAAAATGCAG
  Y
  CGTTTGCCTA GTGAGGAGGC CTAGT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46299109	mCV25135550	ABI	CRAMUS_MOUSE	f	SNP	C	C	T	C
ss136640064	ENSMUSSNP2043543	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C		C
ss323007795	CHEV_9_75132985	CHEVERUD	SCREENING_POP	f	SNP					C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33628337					SNP	C	C	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:75192460 () rs orientation: forward

Symbol	Name	Function Class
Myo5c	myosin VC	within coordinates
Rr197405	regulatory region 197405	1860 bp distal
Rr197406	regulatory region 197406	141 bp proximal
Rr204947	regulatory region 204947	258 bp proximal
Rr212263	regulatory region 212263	1832 bp distal