rs33631376 SNP Detail

Summary

• ID
  rs33631376
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:12516269 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGGTCCTGAG TTTAGTTCTC
  AAACACTCAT GTCTAGTGGC TGACAACACC CATAAATCAA GCTCCAGGTG ATCAGACACC
  TTTTTCTGGG CTCTATAGGC CCAGTACACA ATTAGGCACA TGTATACCTG TGCATATGAT
  AAGTCATCAG AGAAAAGAAT TTTCATTAAC ACATGTCAAA AACGTGTAAT AGAGATTTGA
  Y
  TCAAGACGGT GGTGGCCACT GGTACCGGAG GAACTGCAGA GCCCTCAGTA TCACCAGAAC
  TAAAAAGCTA GGTCTTATAA GAAGATGCTT TTAGAAACTG GACTCATGAA ATTGGAAGGC
  AAGATGGCTG AGACGTGTGC ACTCAAGAGA TGTGGATCTG GGAATGTTGC AAGTAGGGCT
  CTCAGGGTGG TGGCCTCCTA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	BTBR T<+> Itpr3/J	CAST/EiJ	FVB/NJ	KK/HlJ	MOLF/EiJ	WSB/EiJ
ss46837294	NES10986575	PERLEGEN	MM_PANEL2	f	SNP	C	C	T	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	A/J	BTBR T<+> Itpr3/J	CAST/EiJ	FVB/NJ	KK/HlJ	MOLF/EiJ	WSB/EiJ
rs33631376					SNP	C	C	T	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46837294	NES10986575	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:12516269 () rs orientation: forward

Symbol	Name	Function Class
Rr2752	regulatory region 2752	469 bp distal
Rr2753	regulatory region 2753	1532 bp proximal