rs33631382 SNP Detail

Summary

• ID
  rs33631382
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:12516420 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAAAAGAATT TTCATTAACA
  CATGTCAAAA ACGTGTAATA GAGATTTGAC TCAAGACGGT GGTGGCCACT GGTACCGGAG
  GAACTGCAGA GCCCTCAGTA TCACCAGAAC TAAAAAGCTA GGTCTTATAA GAAGATGCTT
  TTAGAAACTG GACTCATGAA ATTGGAAGGC AAGATGGCTG AGACGTGTGC ACTCAAGAGA
  Y
  GTGGATCTGG GAATGTTGCA AGTAGGGCTC TCAGGGTGGT GGCCTCCTAG AAAGCTGCTG
  CTGCTGCTGG AGGCCATGTT GTGGTCTGTG CTCCATGCTA CAGCCAGGAG TCAAGCTAGT
  GTCCTGGGTC CATGCTGTTA TCAGAGGACA TGGTGTCCAT GGTCCCTGTT GCTGTTGGTT
  GTTAAGTACA AGGAAACTTC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	BTBR T<+> Itpr3/J	CAST/EiJ	FVB/NJ	MOLF/EiJ	WSB/EiJ
ss46837300	NES10986577	PERLEGEN	MM_PANEL2	f	SNP	T	T	C	T	C	T
SNP Consensus Information
SNP					Consensus Type	A/J	BTBR T<+> Itpr3/J	CAST/EiJ	FVB/NJ	MOLF/EiJ	WSB/EiJ
rs33631382					SNP	T	T	C	T	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46837300	NES10986577	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:12516420 () rs orientation: forward

Symbol	Name	Function Class
Rr2752	regulatory region 2752	620 bp distal
Rr2753	regulatory region 2753	1381 bp proximal