rs33633067 SNP Detail

Summary

• ID
  rs33633067
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:164720248 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TAATT TCAGCACCCA GCAGGCAGAC
  R
  GACTGCTGAG TTCCTGGTCT GCCAG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45302390	mCV23132571	ABI	CRAMUS_MOUSE	f	SNP	G	G	A	G
ss148232696	ENSMUSSNP6176867	ENSEMBL	ENSEMBL_Sanger	f	SNP	G			G
ss320607036	CHEV_2_164703828	CHEVERUD	SCREENING_POP	f	SNP					G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33633067					SNP	G	G	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:164720248 () rs orientation: forward

Symbol	Name	Function Class
4930445K14Rik	RIKEN cDNA 4930445K14 gene	within coordinates
Cpgi12676	CpG island 12676	403 bp proximal
Gm75548	predicted gene, 75548	809 bp downstream
Pcif1	phosphorylated CTD interacting factor 1	1040 bp upstream
Rr397480	regulatory region 397480	882 bp upstream
Rr397481	regulatory region 397481	1475 bp upstream
Rr569748	regulatory region 569748	414 bp distal
Rr569749	regulatory region 569749	270 bp proximal
Rr569750	regulatory region 569750	335 bp proximal
Rr569751	regulatory region 569751	539 bp proximal
Rr569752	regulatory region 569752	1040 bp proximal
Rr569753	regulatory region 569753	1054 bp proximal
Rr569754	regulatory region 569754	1461 bp proximal
Tssr21683	transcription start site region 21683	1030 bp upstream
Tssr21684	transcription start site region 21684	1688 bp upstream
Tssr21685	transcription start site region 21685	1717 bp upstream
Tssr27592	transcription start site region 27592	1407 bp downstream