rs33633112 SNP Detail

Summary

• ID
  rs33633112
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:12518447 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGGCA GAGGCGCAAA AGCACAAAGC
  S
  GCTGCTGCGT CAGGGTCTTC TGTGA                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	CAST/EiJ
ss46837321	NES10986449	PERLEGEN	MM_PANEL2	f	SNP	G	G	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	CAST/EiJ
rs33633112					SNP	G	G	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46837321	NES10986449	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:12518447 () rs orientation: forward

Symbol	Name	Function Class
Cpgi22627	CpG island 22627	59 bp proximal
Gm4984	predicted pseudogene 4984	95 bp upstream
Rr2753	regulatory region 2753	447 bp distal
Tssr160565	transcription start site region 160565	30 bp upstream
Tssr160566	transcription start site region 160566	40 bp upstream
Tssr160567	transcription start site region 160567	64 bp upstream