ATATCATAGT TTAAAATTTT TAATTTAATT TAAAGTAGCA CTGAGGGTTG AAACCATGCC TCTACAAATG GTAAACAGCC ATTCTACTAT TGAACTACAT GCCCAGCCCT AATATTAAAA ATTTTAGGTA ACTATTTAGT ATGGAATACT TTATTAGATG TTATCCATAA TCCAGCTATC AATTTATGTG TATCGTTGTC Y ATATACCTGT CTTTAATTTT GTTAACCTCA CTTCATATAG TACATTTTAA TCAGTTATTA ACTACAGATT TTCAGGTCTT AAGTTCTAAT TATGATTTTC AAAGGCTTCT GCCATATTGA TAATACAGAT ATTAGAGTAT AATATTTAGT ATTATAAACT TAATATTATA AAGGCTAAGG GAATACAACA AATTAAAATG Y = C/T Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129S1/SvImJ |
BTBR T<+> Itpr3 |
CAST/EiJ |
KK/HlJ |
MOLF/EiJ |
PWD/PhJ |
---|---|---|---|---|---|---|---|---|---|---|---|
ss47322003 | NES11090283 | PERLEGEN | MM_PANEL2 | f | SNP | T | T | T | T | C | C |
SNP Consensus Information | |||||||||||
SNP | Consensus Type | 129S1/SvImJ |
BTBR T<+> Itpr3 |
CAST/EiJ |
KK/HlJ |
MOLF/EiJ |
PWD/PhJ |
||||
rs33633410 | SNP | T | T | T | T | C | C |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type |
Alleles |
---|---|---|---|---|---|---|
ss47322003 | NES11090283 | PERLEGEN | MM_PANEL | f | SNP | C/T |
Location: Chr1:46963393 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Rr371227 | regulatory region 371227 | 1585 bp downstream | ||||||
Rr410623 | regulatory region 410623 | 943 bp proximal | ||||||
Tssr11557 | transcription start site region 11557 | 1523 bp downstream | ||||||
Tssr11558 | transcription start site region 11558 | 1552 bp downstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
||
Citing These Resources Funding Information Warranty Disclaimer, Privacy Notice, Licensing, & Copyright Send questions and comments to User Support. |
last database update 12/17/2024 MGI 6.24 |
![]() |
|