rs33633462 SNP Detail

Summary

• ID
  rs33633462
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:152636568 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTCTGGGGAC CCAGCTGAGC
  TCAGCAGGAG AATGGGACCT CCCCAGTCTC CTCCATCAAT GATGATGACA CTAAGCTGAA
  CAGAAGCCAC AGACACGCCT GGGCAGAGCC ATCTTCTCAG GCCCCACATT CCAGATGGTC
  TTTTCTGAGG ACCCTCTGCT TGATCCAGCC AGCTCCACCC ACAAGCTCTT GAAGATCCTA
  K
  CCCTTCCCTA CCCGATGGGT CTCTGAGAAC ATGGCTGCAG GTGCAGGGCA AAGCCAGAAT
  TGCTGTAACT GCCAGGCCAG CAGTGCCTGA CCTACATCTC CATGCTTGGT TGCATGAAAG
  AAAATACAAG GGCTTTCCGT TAGTGCTCAC TAGATGCAGC TGGTTCAGGG AAGCCCGAGT
  TTTTTGAAGG CCTGTCAAGA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J
ss45302209	mCV27575592	ABI	CRAMUS_MOUSE	f	SNP	G	T
ss147974686	ENSMUSSNP5503021	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J
rs33633462					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:152636568 () rs orientation: forward

Symbol	Name	Function Class
Bcl2l1	BCL2-like 1	within coordinates
Rr367333	regulatory region 367333	within coordinates
Rr374092	regulatory region 374092	1221 bp downstream
Rr567472	regulatory region 567472	1706 bp distal
Rr567473	regulatory region 567473	726 bp distal
Rr567474	regulatory region 567474	within coordinates