rs33633576 SNP Detail

Summary

• ID
  rs33633576
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:30224500 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AATAG GAATAAGAGG AGCAGGAGGA
  Y
  CAGGACCGCT CGGGCCGCGC TACCC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J
ss39559418	mCV24979314	ABI	CRAMUS_MOUSE	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J
rs33633576					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:30224500 () rs orientation: forward

Symbol	Name	Function Class
Cpgi8934	CpG island 8934	within coordinates
Gm50019	predicted gene, 50019	734 bp upstream
Tssr143600	transcription start site region 143600	1133 bp downstream
Tssr143601	transcription start site region 143601	1007 bp downstream
Tssr143602	transcription start site region 143602	680 bp downstream
Tssr143603	transcription start site region 143603	650 bp downstream
Tssr143604	transcription start site region 143604	428 bp downstream
Tssr143605	transcription start site region 143605	253 bp upstream
Tssr143606	transcription start site region 143606	361 bp upstream
Tssr147242	transcription start site region 147242	886 bp upstream
Tssr147243	transcription start site region 147243	109 bp downstream
Zfand3	zinc finger, AN1-type domain 3	within coordinates