rs33634192 SNP Detail

Summary

• ID
  rs33634192
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:46964249 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAAGAAACAA ATTTCACAGA
  GCCAAACCTA TAAATTCCAT AAAAAAGAAA TTCCATAAAA AAGAATTATT TATTGATATG
  TGCGTGTGTG TGTGTGTGTG TGTGTGTGTG TGTGTGTGTG TGTGTGTGCT GCTAGAGACT
  GAACCCAGAG TCCAGAGTCT TCTACTAAGC TATGTTCTGA GTCTCAGGGT CAGATTTAGA
  K
  TCTTGCAATT CTATAAAAAA AAATGCTGAA AAATAATTCA GATCTGTTAT TCTGCCAATT
  TAGTTACTGC TGTCAAGGAA CACTGCACAA TGCCCTCTAG TGATGAGTGG CCATGGATGA
  CTATTTGCAT AGAAATGACT GGGTGACAAT GGGAAATGAT TCCCAGAGTA TTATGCATAA
  GACAGAAAAT CTTTCTGAGA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47322015	NES11090292	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	G	T	T	T	G	T	T	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs33634192					SNP	T	T	T	T	T	T	G	T	T	T	G	T	T	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47322015	NES11090292	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:46964249 () rs orientation: forward

Symbol	Name	Function Class
Rr410623	regulatory region 410623	87 bp proximal
Tssr11557	transcription start site region 11557	667 bp downstream
Tssr11558	transcription start site region 11558	696 bp downstream