rs33634629 SNP Detail

Summary

• ID
  rs33634629
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:54568723 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTCTT TTTCCTTCAC AGAGATCTGG
  Y
  GAAGAAACCG AGACTCAGAA AGAGG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J
ss46299668	mCV24161057	ABI	CRAMUS_MOUSE	f	SNP	C					C		T
ss52018245	NES15041879	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	T	C		T	T	C	T		C	C	C
ss136506917	ENSMUSSNP1264733	ENSEMBL	ENSEMBL_Sanger	f	SNP	C							T
ss322965579	CHEV_9_54509246	CHEVERUD	SCREENING_POP	f	SNP											C				T
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J
rs33634629					SNP	C	C	C	T	C	C	T	T	C	T	C	C	C	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52018245	NES15041879	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:54568723 () rs orientation: forward

Symbol	Name	Function Class
Acsbg1	acyl-CoA synthetase bubblegum family member 1	within coordinates
Rr206444	regulatory region 206444	within coordinates
Tssr89653	transcription start site region 89653	227 bp downstream
Tssr89654	transcription start site region 89654	405 bp downstream
Tssr89655	transcription start site region 89655	445 bp downstream