CAAACGCTCG CAGGTCCCCG GAGGCGCCGC CGCCCCCCGA CGGCGCGGGC CGCCGCTCGT CCGCGTTGTG GATGAAGTGG CAGCGCGGGC CGTAGGGGCA R AAGCCGATGG TGTGGAAGGT GCGGCACAGC TCTGTCTTGT ACTTGGGGTG CCGGGTGAGG CTGCGCAGCT CGTGGAAGCC GTGCGCGAAC TGGCACTTC R = A/G Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | A/J |
C57BL/6J |
DBA/2J |
---|---|---|---|---|---|---|---|---|
ss39559696 | mCV23110575 | ABI | CRAMUS_MOUSE | f | SNP | G | G | A |
SNP Consensus Information | ||||||||
SNP | Consensus Type | A/J |
C57BL/6J |
DBA/2J |
||||
rs33635152 | SNP | G | G | A |
Location: Chr17:84494015 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Cpgi9565 | CpG island 9565 | within coordinates | ||||||
Cpgi9566 | CpG island 9566 | 1024 bp proximal | ||||||
Gm56881 | predicted gene, 56881 | 1560 bp upstream | ||||||
Rr340271 | regulatory region 340271 | within coordinates | ||||||
Rr405496 | regulatory region 405496 | 1286 bp upstream | ||||||
Tssr146044 | transcription start site region 146044 | 826 bp downstream | ||||||
Tssr146045 | transcription start site region 146045 | 503 bp upstream | ||||||
Tssr149650 | transcription start site region 149650 | 1000 bp upstream | ||||||
Tssr149651 | transcription start site region 149651 | 946 bp upstream | ||||||
Tssr149652 | transcription start site region 149652 | 566 bp upstream | ||||||
Tssr149653 | transcription start site region 149653 | 514 bp upstream | ||||||
Tssr149654 | transcription start site region 149654 | 390 bp upstream | ||||||
Tssr149655 | transcription start site region 149655 | 246 bp upstream | ||||||
Tssr149656 | transcription start site region 149656 | 205 bp upstream | ||||||
Tssr149657 | transcription start site region 149657 | within coordinates | ||||||
Tssr149658 | transcription start site region 149658 | 47 bp downstream | ||||||
Tssr149659 | transcription start site region 149659 | 82 bp downstream | ||||||
Tssr149660 | transcription start site region 149660 | 113 bp downstream | ||||||
Tssr149661 | transcription start site region 149661 | 162 bp downstream | ||||||
Tssr149662 | transcription start site region 149662 | 221 bp downstream | ||||||
Tssr149663 | transcription start site region 149663 | 285 bp downstream | ||||||
Tssr149664 | transcription start site region 149664 | 326 bp downstream | ||||||
Tssr149665 | transcription start site region 149665 | 371 bp downstream | ||||||
Tssr149666 | transcription start site region 149666 | 440 bp downstream | ||||||
Tssr149667 | transcription start site region 149667 | 529 bp downstream | ||||||
Tssr149668 | transcription start site region 149668 | 584 bp downstream | ||||||
Tssr149669 | transcription start site region 149669 | 617 bp downstream | ||||||
Tssr149670 | transcription start site region 149670 | 1150 bp downstream | ||||||
Tssr149671 | transcription start site region 149671 | 1240 bp downstream | ||||||
Tssr149672 | transcription start site region 149672 | 1352 bp downstream | ||||||
Zfp36l2 | zinc finger protein 36, C3H type-like 2 | within coordinates |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
||
Citing These Resources Funding Information Warranty Disclaimer, Privacy Notice, Licensing, & Copyright Send questions and comments to User Support. |
last database update 12/17/2024 MGI 6.24 |
![]() |
|