rs33635152 SNP Detail

Summary

• ID
  rs33635152
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:84494015 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CAAACGCTCG CAGGTCCCCG GAGGCGCCGC CGCCCCCCGA
  CGGCGCGGGC CGCCGCTCGT CCGCGTTGTG GATGAAGTGG CAGCGCGGGC CGTAGGGGCA
  R
  AAGCCGATGG TGTGGAAGGT GCGGCACAGC TCTGTCTTGT ACTTGGGGTG CCGGGTGAGG
  CTGCGCAGCT CGTGGAAGCC GTGCGCGAAC TGGCACTTC                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss39559696	mCV23110575	ABI	CRAMUS_MOUSE	f	SNP	G	G	A
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs33635152					SNP	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:84494015 () rs orientation: forward

Symbol	Name	Function Class
Cpgi9565	CpG island 9565	within coordinates
Cpgi9566	CpG island 9566	1024 bp proximal
Gm56881	predicted gene, 56881	1560 bp upstream
Rr340271	regulatory region 340271	within coordinates
Rr405496	regulatory region 405496	1286 bp upstream
Tssr146044	transcription start site region 146044	826 bp downstream
Tssr146045	transcription start site region 146045	503 bp upstream
Tssr149650	transcription start site region 149650	1000 bp upstream
Tssr149651	transcription start site region 149651	946 bp upstream
Tssr149652	transcription start site region 149652	566 bp upstream
Tssr149653	transcription start site region 149653	514 bp upstream
Tssr149654	transcription start site region 149654	390 bp upstream
Tssr149655	transcription start site region 149655	246 bp upstream
Tssr149656	transcription start site region 149656	205 bp upstream
Tssr149657	transcription start site region 149657	within coordinates
Tssr149658	transcription start site region 149658	47 bp downstream
Tssr149659	transcription start site region 149659	82 bp downstream
Tssr149660	transcription start site region 149660	113 bp downstream
Tssr149661	transcription start site region 149661	162 bp downstream
Tssr149662	transcription start site region 149662	221 bp downstream
Tssr149663	transcription start site region 149663	285 bp downstream
Tssr149664	transcription start site region 149664	326 bp downstream
Tssr149665	transcription start site region 149665	371 bp downstream
Tssr149666	transcription start site region 149666	440 bp downstream
Tssr149667	transcription start site region 149667	529 bp downstream
Tssr149668	transcription start site region 149668	584 bp downstream
Tssr149669	transcription start site region 149669	617 bp downstream
Tssr149670	transcription start site region 149670	1150 bp downstream
Tssr149671	transcription start site region 149671	1240 bp downstream
Tssr149672	transcription start site region 149672	1352 bp downstream
Zfp36l2	zinc finger protein 36, C3H type-like 2	within coordinates