rs33635856 SNP Detail

Summary

• ID
  rs33635856
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:33855192 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACCTG GGATTATAGG CGTGGCGTGG
  M
  TTCTTTCATA TTTCTACCTG ACTCC                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39560077	mCV24098507	ABI	CRAMUS_MOUSE	f	SNP	C	C	A	C	C
ss145493293	ENSMUSSNP1868182	ENSEMBL	ENSEMBL_Sanger	f	SNP			A		C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs33635856					SNP	C	C	A	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss159834552	UOL_MMUSEQ_3113	UOL_CGR	Mmu17_30637692_36837814	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:33855192 () rs orientation: forward

Symbol	Name	Function Class
Gm20507	predicted gene 20507	within coordinates
Pram1	PML-RAR alpha-regulated adaptor molecule 1	1838 bp upstream
Tssr143785	transcription start site region 143785	1582 bp upstream
Tssr143786	transcription start site region 143786	1603 bp upstream
Tssr143787	transcription start site region 143787	1871 bp upstream
Tssr143788	transcription start site region 143788	1902 bp upstream
Tssr143789	transcription start site region 143789	1912 bp upstream