rs33636385 SNP Detail

Summary

• ID
  rs33636385
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:21576570 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AATACCTGAA GAAAATCAAA
  ATTTTTGAGC TGTCAATTTA TTTTGCATCT TGTTTTGAGA CTATTATAAG TTTATGGAAT
  TGCCAGGTCT CATTGAAAAT TGCTTTAAAT TTGGGTATAT TAAACATACA GTTTAAAAAC
  AAAAACTCTT ATAAGCCTAT GAATTTTTCT GAGCATTTGG CTCAAACTTT CTCTTCTACT
  K
  AAGTTTTGTG GGTTGATATC AATTGCCTAG ATAATCCCAC CTCTACCAGA AGAAGCATAG
  AGGACAGCCA CAGGAGGCAG AAATGTTCCA AAAGTCATAG ACAATAACCC AACTTTAGGA
  TAACTGCTTA GAAAGAACTT TCCATATGCT GAGGAAATGG CAAAAAGTAC TTGCTGGTCT
  TCTTTCTAGG AGACTGAAGT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss46838246	NES10849080	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs33636385					SNP	G	G	G	G	G	G	G	G	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46838246	NES10849080	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:21576570 () rs orientation: forward

Symbol	Name	Function Class
Gm65698	predicted gene, 65698	within coordinates
Rr574129	regulatory region 574129	1919 bp proximal