rs33637866 SNP Detail

Summary

• ID
  rs33637866
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:6157954 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTAACCCAGC TCCTGCTGCT GATGTGAAGT TTCACCGTTT
  GTGGGCAATT AACAAGGAGG TGTCCACTTC TTTCTTTCTG AGGCGCCTCT TGCTGGGAAG
  R
  TGAGGGCCGT CTAGCTTTGT GGCTTGAATT GAATGTGGAG GGGTTGATAG TCATCGGTGA
  GATTGATGTC ATGTAGGGAC CTGTTCCTTC TACCTGCCA                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39560733	mCV22810925	ABI	CRAMUS_MOUSE	f	SNP	G	A	G
ss145081313	ENSMUSSNP6891957	ENSEMBL	ENSEMBL_Sanger	f	SNP	G		G
ss325290091	CHEV_17_6107679	CHEVERUD	SCREENING_POP	f	SNP				G	G
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33637866					SNP	G	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:6157954 () rs orientation: forward

Symbol	Name	Function Class
Cpgi8568	CpG island 8568	124 bp distal
Gm65964	predicted gene, 65964	1309 bp upstream
Rr340081	regulatory region 340081	within coordinates
Rr405018	regulatory region 405018	662 bp downstream
Tssr4988	transcription start site region 4988	388 bp downstream
Tssr142458	transcription start site region 142458	1197 bp downstream
Tssr142459	transcription start site region 142459	1116 bp downstream
Tssr142460	transcription start site region 142460	1079 bp downstream
Tssr142461	transcription start site region 142461	1062 bp downstream
Tssr142462	transcription start site region 142462	860 bp downstream
Tssr142463	transcription start site region 142463	841 bp downstream
Tssr142464	transcription start site region 142464	804 bp downstream
Tssr142465	transcription start site region 142465	772 bp downstream
Tssr142466	transcription start site region 142466	757 bp downstream
Tssr142467	transcription start site region 142467	517 bp downstream
Tssr146313	transcription start site region 146313	1372 bp upstream
Tssr146314	transcription start site region 146314	1191 bp upstream
Tssr146315	transcription start site region 146315	1140 bp upstream
Tulp4	TUB like protein 4	within coordinates