rs33638763 SNP Detail

Summary

• ID
  rs33638763
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:164116161 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGACA GCCAGGGCTA TACAGAGAAA
  Y
  GCTGACTCGA AAAGCCAAAA AAAAA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45302933	mCV23736630	ABI	CRAMUS_MOUSE	f	SNP	C	C	T	C	C
ss148221248	ENSMUSSNP6908359	ENSEMBL	ENSEMBL_Sanger	f	SNP			T		C
ss320605180	CHEV_2_164099977	CHEVERUD	SCREENING_POP	f	SNP						C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33638763					SNP	C	C	T	C	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:164116161 () rs orientation: forward

Symbol	Name	Function Class
Svs4	seminal vesicle secretory protein 4	1715 bp downstream
Tssr21549	transcription start site region 21549	1711 bp upstream
Tssr21550	transcription start site region 21550	1817 bp upstream
Tssr27409	transcription start site region 27409	1737 bp downstream
Tssr27410	transcription start site region 27410	1760 bp downstream
Tssr27411	transcription start site region 27411	1797 bp downstream
Tssr27412	transcription start site region 27412	1835 bp downstream
Tssr27413	transcription start site region 27413	1842 bp downstream
Tssr27414	transcription start site region 27414	1860 bp downstream
Tssr27415	transcription start site region 27415	1876 bp downstream