rs33639565 SNP Detail

Summary

• ID
  rs33639565
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:121378787 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGGTG ACACTACTGC AATCATCAGT
  S
  TAGTAAAATA AGTGACTTTT ATTTG                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45302831	mCV24429886	ABI	CRAMUS_MOUSE	f	SNP	G	G	C	G
ss147390351	ENSMUSSNP968757	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G		G
ss320483648	CHEV_2_121374042	CHEVERUD	SCREENING_POP	f	SNP					C	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33639565					SNP	G	G	C	G	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:121378787 () rs orientation: forward

Symbol	Name	Function Class
Frmd5	FERM domain containing 5	within coordinates
Rr406973	regulatory region 406973	1689 bp proximal
Tssr25942	transcription start site region 25942	1308 bp downstream