rs33643496 SNP Detail

Summary

• ID
  rs33643496
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:67623254 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AACAC GTCTACTTCT ATGCCAGAAT
  Y
  CCAAGGAAAA GCCCCATTGT CCAGG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	AKR/J	BALB/cByJ	C57BL/6J	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	PWD/PhJ	SM/J
ss46300669	mCV25294147	ABI	CRAMUS_MOUSE	f	SNP	C	T			T	T
ss61411910	NES16794257	PERLEGEN	MM_PANEL2	f	SNP		T	T	T		T	C	C		C	T
ss136584951	ENSMUSSNP6146728	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T				T
ss322992319	CHEV_9_67563779	CHEVERUD	SCREENING_POP	f	SNP									T			C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	AKR/J	BALB/cByJ	C57BL/6J	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	PWD/PhJ	SM/J
rs33643496					SNP	C	T	T	T	T	T	C	C	T	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61411910	NES16794257	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:67623254 () rs orientation: forward

Symbol	Name	Function Class
Gm67856	predicted gene, 67856	within coordinates