rs33644395 SNP Detail

Summary

• ID
  rs33644395
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:103058299 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CAGTT CCTTCCTACT CCAGCCGAGC
  K
  AAGAGCTGAG GCTGTGGGTT TGCAG                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J
ss46300935	mCV23016909	ABI	CRAMUS_MOUSE	f	SNP	T	G	G
ss136876298	ENSMUSSNP1211892	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J
rs33644395					SNP	T	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:103058299 () rs orientation: forward

Symbol	Name	Function Class
Cpgi22231	CpG island 22231	within coordinates
Rab6b	RAB6B, member RAS oncogene family	within coordinates
Tssr86769	transcription start site region 86769	288 bp upstream
Tssr86770	transcription start site region 86770	351 bp upstream