rs33647008 SNP Detail

Summary

• ID
  rs33647008
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:21483846 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTTCTACTTT TACTCTAGTC
  ATTAGTGACT GCTTTCATAT TTGAAAATCT ATCGAAAGGC TTGAATTTTG TAATTGATTA
  ATTAATTTTG CATGCAGGTA TTTTGTATGC ATGTGTGCCT GGTGCCCACA GAGTCCAGAA
  GAGGGTGGCA GACACTGAAC CAGGGTCCTC TGGAAGAGCA GTCAGTGCTC TTAATGGCTG
  M
  GCCATCTCTC CAGCCACAGT GCCTTTTATA ATTTTAGTGT ACTAGGAAAG ATCGGGCATT
  GTCATAGAAT GATACCCATG ATAAGGGCAT CAGAGCTCCT CTCTCTCCTT CCAATAGAGC
  TGTAGTGAGG TGAGCTATGC TCTCAGAACA TGGTACTGAC CATTGCATAT CGAGAGAAAT
  GTTCTCAGTC ACTTGTCTCT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss45804189	mCV22738722	ABI	CRAMUS_MOUSE	f	SNP	A	C
ss148005786	ENSMUSSNP2244073	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs33647008					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:21483846 () rs orientation: forward

Symbol	Name	Function Class
Gm43214	predicted gene 43214	422 bp downstream
Gsap	gamma-secretase activating protein	within coordinates
Rr607882	regulatory region 607882	957 bp distal
Tssr45322	transcription start site region 45322	470 bp downstream
Tssr45323	transcription start site region 45323	775 bp upstream