rs33648070 SNP Detail

Summary

• ID
  rs33648070
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:24004922 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCCCG CATCCCCAGA CCTCTAGGCT
  R
  GGAGTCGCTT CTGGAGCCAG GACCC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39561214	mCV25239023	ABI	CRAMUS_MOUSE	f	SNP	G	G	A	G
ss145332663	ENSMUSSNP1821116	ENSEMBL	ENSEMBL_Sanger	f	SNP		G		G
ss325327334	CHEV_17_23922915	CHEVERUD	SCREENING_POP	f	SNP					G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33648070					SNP	G	G	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:24004922 () rs orientation: forward

Symbol	Name	Function Class
Cpgi8693	CpG island 8693	within coordinates
Flywch2	FLYWCH family member 2	within coordinates
Tssr146663	transcription start site region 146663	98 bp downstream
Tssr146664	transcription start site region 146664	143 bp downstream
Tssr146665	transcription start site region 146665	249 bp downstream