rs33650479 SNP Detail

Summary

• ID
  rs33650479
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:73294083 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AAATT AGTGTGTACT CCCGCAGAGT
  S
  GATTCTTCCT TTGTCTTATT GTGTG                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	NOD/ShiLtJ	SM/J	WSB/EiJ
ss39562003	mCV23496704	ABI	CRAMUS_MOUSE	f	SNP	C	C				G		C
ss62893049	NES17390937	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C		C	C	C	G		G		C
ss145927762	ENSMUSSNP5195069	ENSEMBL	ENSEMBL_Sanger	f	SNP		C
ss325448515	CHEV_17_73336428	CHEVERUD	SCREENING_POP	f	SNP											G		C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	NOD/ShiLtJ	SM/J	WSB/EiJ
rs33650479					SNP	C	C	C	C	C	G	C	C	C	G	G	G	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss62893049	NES17390937	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:73294083 () rs orientation: forward

Symbol	Name	Function Class
Gm23649	predicted gene, 23649	710 bp upstream