rs33652240 SNP Detail

Summary

• ID
  rs33652240
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:12819793 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTACTTTATG GGAAGAAATA
  CACACTGAGG TGAATTGGAA TCACCCTGCT GGCAAACATA ACCCAAGTGT CACATTCAAC
  TCACTGTTGC CCATGTTGAC ACCTTTCCAT GTCAGCAACT GTAACTCTAC CTTATTATTC
  CAACAGTCAC AAAGGAACAC ATTGACCCCG TGTACTACAG TTAGTTTAGT TTGATTTCTT
  R
  TTCTTGGAGA TCAAATTGAT TCTCCTTCCA GCTTTCTGTG TCAGTCTTGC ACTGGACACA
  TATCTAAATA GACATAACTA ATTATTTCTT TTTAAAAAAT TCCTAGAAGT GGGATTTCAA
  GACCAAAAGG GTTTTTGTTG TTGTTCTTGT TTGTTTGTTT GTTTGTTTTG AGATGGAGTT
  TTACTATATA ATTGTCTTAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	CAST/EiJ	KK/HlJ	PWD/PhJ
ss46839759	NES10975246	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	A
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	CAST/EiJ	KK/HlJ	PWD/PhJ
rs33652240					SNP	G	G	G	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46839759	NES10975246	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:12819793 () rs orientation: forward

Symbol	Name	Function Class
Gm61865	predicted gene, 61865	within coordinates
Tssr163007	transcription start site region 163007	1163 bp downstream