rs33655399 SNP Detail

Summary

• ID
  rs33655399
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:23974406 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTCTTGACTG TAACATCTTA GTGTTTTTTT CTTGCACACA
  TCAAGTACAG TGGTTCATCA GTTCTTTACC CTCAGAGTTC TTAGATCCAT TTTCTTTTGC
  W
  GACAGTTCTT CATGGACAAC ACTCCATTTT AACTCCATTT TCCAGAGGAG AGCTCACCCT
  TGCAAATAGC AAGTGACTTA ACCCAAGTGA AGCCTGTGCA                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BALB/cByJ	C3H/HeJ	DBA/2J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	WSB/EiJ
ss47824859	NES11962252	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	T	A	A
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BALB/cByJ	C3H/HeJ	DBA/2J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	WSB/EiJ
rs33655399					SNP	A	A	A	A	A	A	T	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47824859	NES11962252	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:23974406 () rs orientation: forward

Symbol	Name	Function Class
Gm66949	predicted gene, 66949	within coordinates