rs33657806 SNP Detail

Summary

• ID
  rs33657806
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:48917139 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TGTCCTCCGG GGCTGAGATC TTTTTTTTTT CCCCTCCCAG
  GTAAGCACCA GGAATGATAA CTAGCAACAT GCTAAAGAAT TTTCTTTTTA TTCTGCTCAA
  S
  CACAAAAATC TTACCTGGAG GCTTCACTGT TGGGGCCTTC CAATCTTTCC TGAGCTTTAA
  TACAGAAAAT AAATTCAATT CCAGCACTTA GCAGCTGCC                       
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	MSM/Ms	SM/J
ss39562765	mCV25303053	ABI	CRAMUS_MOUSE	f	SNP	G	C	G	C
ss145720320	ENSMUSSNP1337220	ENSEMBL	ENSEMBL_Sanger	f	SNP		C		C		G
ss325409601	CHEV_17_48749436	CHEVERUD	SCREENING_POP	f	SNP					G		C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	MSM/Ms	SM/J
rs33657806					SNP	G	C	G	C	G	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:48917139 () rs orientation: forward

Symbol	Name	Function Class
Cpgi9295	CpG island 9295	951 bp proximal
Gm64620	predicted gene, 64620	1378 bp upstream