rs33658234 SNP Detail

Summary

• ID
  rs33658234
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:31427670 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCACG GAGGCACAAG TCGGAGGTGT
  R
  CTTCAGGGAA CCCGGGTCTC AGGGA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	C57BL/6J	DBA/2J
ss39562963	mCV24710823	ABI	CRAMUS_MOUSE	f	SNP	A	G	A
ss145458096	ENSMUSSNP1352892	ENSEMBL	ENSEMBL_Sanger	f	SNP	A		A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	C57BL/6J	DBA/2J
rs33658234					SNP	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:31427670 () rs orientation: forward

Symbol	Name	Function Class
Rr339574	regulatory region 339574	within coordinates
Rr370214	regulatory region 370214	599 bp downstream
Tssr143654	transcription start site region 143654	584 bp downstream
Tssr147277	transcription start site region 147277	101 bp downstream
Tssr147278	transcription start site region 147278	117 bp downstream
Ubash3a	ubiquitin associated and SH3 domain containing, A	within coordinates