rs33662980 SNP Detail

Summary

• ID
  rs33662980
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:78239362 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGTGT GTGGCTGCCT CTCTGAGGTA
  R
  TCTCACCTTC AGCAGAGGGA AAGGG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46303051	mCV24232315	ABI	CRAMUS_MOUSE	f	SNP	G	A	G	A
ss136666863	ENSMUSSNP956320	ENSEMBL	ENSEMBL_Sanger	f	SNP		A		A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs33662980					SNP	G	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:78239362 () rs orientation: forward

Symbol	Name	Function Class
Gm70238	predicted gene, 70238	within coordinates
Gsta2	glutathione S-transferase, alpha 2 (Yc2)	within coordinates
Tssr2946	transcription start site region 2946	1225 bp upstream