rs33663467 SNP Detail

Summary

• ID
  rs33663467
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:111258112 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTGGAAGCCA GTCTTGTCAC TGATTGCATG ACACGAATTC
  TCTTTTGTAA GATAAAACAT TCTTTAACCA TTAGCTCCAC CTCATTACCA GCAATTTCCA
  Y
  GTTTAAGTTT TTTTTTTTTT CCTTAAAGAC TGAGATAAAT AGCACCTGTC CCTGCAGGAC
  ACTTGAGTGA CGATACCCAT GTGCTTCATT TCATGTCTT                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss46303298	mCV23328704	ABI	CRAMUS_MOUSE	f	SNP	C	T	C
ss136966990	ENSMUSSNP2682220	ENSEMBL	ENSEMBL_Sanger	f	SNP	C		C
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs33663467					SNP	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:111258112 () rs orientation: forward

Symbol	Name	Function Class
Rr192826	regulatory region 192826	512 bp distal
Rr198795	regulatory region 198795	within coordinates
Rr202628	regulatory region 202628	762 bp distal
Rr202629	regulatory region 202629	649 bp distal