rs33663796 SNP Detail

Summary

• ID
  rs33663796
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:45175845 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TATGA AGAAGCTGAG AGTGGGAGGG
  R
  CCTAGTCGTG GTTTTCTGCT GGAGA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss46303787	mCV24323162	ABI	CRAMUS_MOUSE	f	SNP	G	A	A
ss136408177	ENSMUSSNP5511424	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A	A
ss322942722	CHEV_9_45072630	CHEVERUD	SCREENING_POP	f	SNP				G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs33663796					SNP	G	A	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:45175845 () rs orientation: forward

Symbol	Name	Function Class
Il10ra	interleukin 10 receptor, alpha	within coordinates
Tssr84758	transcription start site region 84758	335 bp upstream
Tssr89253	transcription start site region 89253	1608 bp upstream
Tssr89254	transcription start site region 89254	1539 bp upstream
Tssr89255	transcription start site region 89255	1479 bp upstream
Tssr89256	transcription start site region 89256	1448 bp upstream
Tssr89257	transcription start site region 89257	357 bp upstream
Tssr89258	transcription start site region 89258	313 bp upstream
Tssr89259	transcription start site region 89259	296 bp upstream