rs33667161 SNP Detail

Summary

• ID
  rs33667161
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:180123241 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CCCAACAAGA ACAGTTGCTG TTAATTTCTT ACTCTTCCCA
  GAGGCCTCTG TGGACTCCTG CAAAGGGACC AAGGGACAAA CAGGTTGGCT AGGGGACAGC
  Y
  AGGACCTGTC AGAAAAGAGG TGAGAGGAGA GGGGACAGGG TGAGAGGAAG GGGCTAGCAG
  GGGTGAGTGG CAATGGGTGA GCAGGAAGGG TGTGGAGAG                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45306637	mCV25371997	ABI	CRAMUS_MOUSE	f	SNP	C	C	T	C	T
ss148392674	ENSMUSSNP287498	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	T		T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs33667161					SNP	C	C	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:180123241 () rs orientation: forward

Symbol	Name	Function Class
Cpgi12896	CpG island 12896	1021 bp proximal