rs33667175 SNP Detail

Summary

• ID
  rs33667175
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:118626058 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AATATAAAGC AATGCCAGAG
  AGAAAGAGCT CACTCTAGTA GCATTACACA CAGAGATGCT AAGTTAGAGT ACTCCTTGCT
  TCCTGGTGTT TCTGTAGAAA ACACTCACCC TGTATTCAAG CATATCTACC ACCATGCGCA
  CATACAACGG AAGGCCTAGA AACACTAGAA GCAAACGGAA TTCAACATGC TTCCCGCAGT
  R
  AAATGTACCT ATTGAAAATT GTTCATGAAT AGGTAGACTA TTTTGAGTAT CATTTCATTT
  TTCAAGTGTT GTTTTCCAAA CATGAAATGT CAAGATTTAA ATGAGTCTCG TAGCTCTAAC
  AATACATTTC TGCCACCTCA GACTTAGTGA GTCCTCCTTC TTGTCATGTT TAAGGTATCA
  GACTCAAAAT TCATGTTGTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47326105	NES11373512	PERLEGEN	MM_PANEL2	f	SNP	G	A	G	G	G	G	G	G	G	G	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs33667175					SNP	G	A	G	G	G	G	G	G	G	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47326105	NES11373512	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:118626058 () rs orientation: forward

Symbol	Name	Function Class
Gm31626	predicted gene, 31626	within coordinates
Rr387829	regulatory region 387829	1939 bp downstream
Rr474254	regulatory region 474254	990 bp distal
Rr474255	regulatory region 474255	303 bp distal