rs33670597 SNP Detail

Summary

• ID
  rs33670597
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:50799855 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCCAGGGTGA GCCTCTAGAT
  CCTGGATGCA TTCTTCTAGA AACTGAGCTG CTTTCTGTAG GTGAGGTTTC TGGAGAAGAG
  TCCAGAGAGT TCCCTGCACA CCCAAGGACT CTGATCCTAC AATGGACAGC ATGGGGAGGA
  AAGGAAAGGG CCGCTCCCAG GAGGGAAGCC TCGTCTGTTA GCACTGGCCA CAGGAGGGCT
  R
  GAGGCTTTGG AAATGTGCTT CCTGCTGGCC TGCAGCGTTC CGAGCTGCTC AGGCAGAGGC
  CACAGGGTAG TGCTCTGCCC TCTGTGGCCA ATTCTTTACT GTTCTTCATA GGGTTTTGTA
  CTTGGTATGG AAGTGAAGGG TGTCCTTAGA CTCGGGGAGG CCTGGGTGGT TACCTATGAC
  AACTTTACAA TGATGGAGTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46303783	mCV25210029	ABI	CRAMUS_MOUSE	f	SNP	G	A	A	A
ss136483619	ENSMUSSNP2064519	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A		A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs33670597					SNP	G	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:50799855 () rs orientation: forward

Symbol	Name	Function Class
Gm25558	predicted gene, 25558	500 bp downstream
Ppp2r1b	protein phosphatase 2, regulatory subunit A, beta	within coordinates
Rr195477	regulatory region 195477	within coordinates
Rr209487	regulatory region 209487	within coordinates