rs33671479 SNP Detail

Summary

• ID
  rs33671479
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:47445259 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATGGTCACAT GTTCCAGGCC
  ATGGATCTGA CTGGAACCTT ATCTGAACTC CTGCCATTTT CAATTCTGAG TTTTACTGGG
  GTTCTGAACT TTCCTACTAC ATTACTGGTT CTTCTGTCTG GTGACATGGT CTACTGCCCC
  AAAGAAATGT TCCTAAGGAA ACCCCTATCC CTATGTCTTT ATTGGTGAAA TAACTTGGCA
  Y
  AGGTATTTGT GGATTTTAAA CTTAAAAGTC TTATAGCATC TTAACTCACA GTCACAATTA
  GCTTCTAACT TTGACCTGTG GTCCTTATCA ATCAATCTTG GGTGTGACAT TAAATAAACC
  ATCCGTATTT GACTTAGGTT GGTGTTTGAG TGGTTTATGT GGCAATTTCC TGATCCCAAC
  AAAAACTTTC CACCTGAACT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
ss45306381	mCV25125653	ABI	CRAMUS_MOUSE	f	SNP	T	C	C	C
ss146510157	ENSMUSSNP4229104	ENSEMBL	ENSEMBL_Sanger	f	SNP		C		C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
rs33671479					SNP	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:47445259 () rs orientation: forward

Symbol	Name	Function Class
D2Ucl22	DNA segment, Chr 2, University College London 22	1597 bp proximal