rs33674212 SNP Detail

Summary

• ID
  rs33674212
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:45316936 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGATAGGACA TTAGTCAGGG
  ATGGTGGAGG ATTTCAGACT GAGGTGTGAG TGGCTAACTG TGGTGGCCTC GGGACCAGGA
  TAAATAAAAC AAGTCAGGAC AGGCTGTCAG GGACAGCAGT GCTATTGAGG CTGATCCTGC
  TGGGGACCCA AGATTCACAG GACTGTGGTA AGAAGGGAGC CAGGCCGGGC TCCTTAGGAA
  Y
  ACGGCGGGGA GACATGACTG CCCCATGAGA ATGTAAGCTG TCACGGTGCT ATCCACAGGG
  CCTTGCAGGA AGCTCTGGAG GCTAAGGGAC TTGGAAGTCC CCATCCCGAC CCAGGACCCC
  TATCTATACT TCCCATGTGC CCTTCACCGA GAGTGCATCT TGAAATTCTC ACTTCCTCAT
  CTCACTCCCA GCTGCGGCTT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46304806	mCV25163717	ABI	CRAMUS_MOUSE	f	SNP	T	C	C	C
ss136411261	ENSMUSSNP483021	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C		C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs33674212					SNP	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:45316936 () rs orientation: forward

Symbol	Name	Function Class
Fxyd2	FXYD domain-containing ion transport regulator 2	within coordinates
Gm68814	predicted gene, 68814	within coordinates
Rr677905	regulatory region 677905	208 bp distal
Rr677906	regulatory region 677906	108 bp proximal
Tssr84790	transcription start site region 84790	297 bp upstream
Tssr84791	transcription start site region 84791	428 bp upstream
Tssr84792	transcription start site region 84792	476 bp upstream
Tssr84793	transcription start site region 84793	1481 bp upstream