rs33674360 SNP Detail

Summary

• ID
  rs33674360
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:65496794 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GTGTGAGAGA GAGAGAGAGA GAGAGAGAGA GAGAGAGAGA
  CAGAGAGAGA CAGAGAGAGA CAGAGAGAGA CAGAGAGAGA GACAGAGAGA TACAGAGAGA
  R
  AGACAGAGAG ACAGAGAGAC AGAGAGACAG AGAATGTTGC TGTTGTTTCC TATTACACTT
  GAGTTTGGGA GGTTGGCAGG CTGGACTTTG TATAGGACC                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J
ss45307021	mCV23763846	ABI	CRAMUS_MOUSE	f	SNP	G	A
ss146714850	ENSMUSSNP3782491	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J
rs33674360					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:65496794 () rs orientation: forward

Symbol	Name	Function Class
D2Mit90	DNA segment, Chr 2, Massachusetts Institute of Technology 90	490 bp distal
Rr1450	regulatory region 1450	1545 bp downstream
Rr558096	regulatory region 558096	1663 bp distal
Rr558097	regulatory region 558097	960 bp distal
Rr558098	regulatory region 558098	1825 bp proximal
Scn2a	sodium channel, voltage-gated, type II, alpha	Intron