rs33677429 SNP Detail

Summary

• ID
  rs33677429
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr5:144132551 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GCATC CCTCACAGAC TCAGAACATG
  M
  GTGGGAGCGG CCCCCCGCAG TTTCA                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45807770	mCV22338209	ABI	CRAMUS_MOUSE	f	SNP	C	A	A	A
ss144608227	ENSMUSSNP4454815	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	A		A
ss321709378	CHEV_5_144956602	CHEVERUD	SCREENING_POP	f	SNP					C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33677429					SNP	C	A	A	A	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:144132551 () rs orientation: forward

Symbol	Name	Function Class
Bhlha15	basic helix-loop-helix family, member a15	1292 bp downstream
Rr624360	regulatory region 624360	1003 bp distal
Tecpr1	tectonin beta-propeller repeat containing 1	mRNA-UTR