rs33679084 SNP Detail

Summary

• ID
  rs33679084
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:7630213 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AAGTATGCAT GCACAAGTGT ACATGTATGT GTTGTGTATA
  TGTGCTGTAT GATTTATGAT CTGCATGAGC TTTTAGAAAA CATATTTGGG CAAGACGTAG
  R
  TCCATAAAAC AATTTCACTG TTTATTTAGA AAATCCCCCG GGAACTTTTA AGAGGCGCAA
  AACTGCCCAG TGTCTTTGTT CAGGTGACTT CTTGTACCCG                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss48342780	NES12250314	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	G	A	A	A	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs33679084					SNP	A	A	A	A	A	A	G	A	A	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48342780	NES12250314	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:7630213 () rs orientation: forward

Symbol	Name	Function Class
Gm49630	predicted gene, 49630	within coordinates
Gm64723	predicted gene, 64723	within coordinates
Rr336065	regulatory region 336065	1013 bp distal
Unc93a2	unc-93 homolog A2	1 bp downstream