rs33683157 SNP Detail

Summary

• ID
  rs33683157
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:31406902 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGAGG GTGTTACCCA GTACTGAGGA
  R
  GCAGAGACAG AGACAGAAGG GTCCC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39566135	mCV24387610	ABI	CRAMUS_MOUSE	f	SNP	G	A	G	G
ss145457890	ENSMUSSNP4587133	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A		G
ss325358884	CHEV_17_31324873	CHEVERUD	SCREENING_POP	f	SNP					G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33683157					SNP	G	A	G	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:31406902 () rs orientation: forward

Symbol	Name	Function Class
Rr525395	regulatory region 525395	45 bp distal
Rr525396	regulatory region 525396	307 bp distal
Tmprss3	transmembrane protease, serine 3	within coordinates
Tssr5079	transcription start site region 5079	1670 bp upstream
Tssr5080	transcription start site region 5080	1272 bp upstream