rs33684302 SNP Detail

Summary

• ID
  rs33684302
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:174188996 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CATAC GCATGGGGGC CCAACATATG
  M
  TTGGGCATGA GAAGGGGGAC ACATG                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss45308260	mCV23619986	ABI	CRAMUS_MOUSE	f	SNP	A	C
ss148341583	ENSMUSSNP3951875	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	C
ss320627436	CHEV_2_174172704	CHEVERUD	SCREENING_POP	f	SNP			A	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs33684302					SNP	A	C	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:174188996 () rs orientation: forward

Symbol	Name	Function Class
Gnas	GNAS complex locus	459 bp downstream
Rr572113	regulatory region 572113	within coordinates
Tssr792	transcription start site region 792	853 bp downstream
Tssr22137	transcription start site region 22137	1752 bp downstream
Tssr22138	transcription start site region 22138	1687 bp downstream
Tssr22139	transcription start site region 22139	1170 bp downstream
Tssr22140	transcription start site region 22140	889 bp downstream
Tssr22141	transcription start site region 22141	870 bp downstream
Tssr22142	transcription start site region 22142	833 bp downstream
Tssr22143	transcription start site region 22143	688 bp downstream
Tssr22144	transcription start site region 22144	623 bp downstream
Tssr22145	transcription start site region 22145	602 bp downstream
Tssr22146	transcription start site region 22146	565 bp downstream
Tssr28014	transcription start site region 28014	1663 bp upstream