rs33684840 SNP Detail

Summary

• ID
  rs33684840
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:19087768 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CAAGTGTGCA TTCGTATGGA GTTTGCGCAT TCTCCAAATT
  AGAAGTTAAA GCAATGAGGC CTCTTCCCAT CCTCTTTTCT TTTTGTTCTG TCTCCTTTTA
  R
  TTTCCGCAGG GTGAGGAATG GAACCTGGGA CCAGTGCAGG CAGGTAGGAT TTTCTCGCAC
  TGAGTTGTAC ACATGCCCCA ATATTTTTCT TCTACTCAC                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45308538	mCV24556498	ABI	CRAMUS_MOUSE	f	SNP	G	A	G	A
ss146313246	ENSMUSSNP758837	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A		A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs33684840					SNP	G	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:19087768 () rs orientation: forward

Symbol	Name	Function Class
Rr552430	regulatory region 552430	939 bp proximal
Rr552431	regulatory region 552431	1573 bp proximal