rs33684968 SNP Detail

Summary

• ID
  rs33684968
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:67739336 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTCTT TACCTTTGTC TTCTAACTTG
  S
  GCCTCTGTCC CTAGTTCCAA GAGGC                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
ss46306023	mCV25294856	ABI	CRAMUS_MOUSE	f	SNP	C	C	C	G
ss136586199	ENSMUSSNP3001989	ENSEMBL	ENSEMBL_Sanger	f	SNP		C		G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
rs33684968					SNP	C	C	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:67739336 () rs orientation: forward

Symbol	Name	Function Class
C2cd4a	C2 calcium-dependent domain containing 4A	within coordinates
Cpgi21983	CpG island 21983	166 bp distal
Rr196859	regulatory region 196859	1865 bp proximal
Rr206662	regulatory region 206662	within coordinates
Tssr90357	transcription start site region 90357	271 bp downstream