rs33687377 SNP Detail

Summary

• ID
  rs33687377
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:7261229 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTCCGCTTTA TTCCTGGGCC GCCTGTGTCA GGTGGATAGT
  GTCTGACCAC CGGTGCTAAG CAGCGCTTTT CAGTAATGCC ATGAGAATGC AGCAGTAAAA
  Y
  TCCTGATCAC AAAACTTAAC AACATGTTAC CCAGGTCTAA TAGCACGTCT CCCCAAGGCA
  CTGGTGGTGT AACTGAGAAT ACATATTGTT TTGAAACTGG                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss48343613	NES12250535	PERLEGEN	MM_PANEL2	f	SNP	T	C	C	C	C	C	C	C	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs33687377					SNP	T	C	C	C	C	C	C	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48343613	NES12250535	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:7261229 () rs orientation: forward

Symbol	Name	Function Class
Gm49721	predicted gene, 49721	within coordinates
Rnaset2b	ribonuclease T2B	within coordinates
Tssr146343	transcription start site region 146343	565 bp upstream