rs33688410 SNP Detail

Summary

• ID
  rs33688410
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:70636979 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTGAG CGGATCTTTG TTTGAAACTG
  S
  CTAATGTTCT CCACTCACTG CTCAT                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss46306262	mCV25010263	ABI	CRAMUS_MOUSE	f	SNP		G	G					C
ss52027517	NES15043612	PERLEGEN	MM_PANEL2	f	SNP	G		G	C	G	G	G		G	G	G	G		G	G	G	G		G
ss322999857	CHEV_9_70577504	CHEVERUD	SCREENING_POP	f	SNP													C					G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs33688410					SNP	G	G	G	C	G	G	G	C	G	G	G	G	C	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52027517	NES15043612	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:70636979 () rs orientation: forward

Symbol	Name	Function Class
Adam10	a disintegrin and metallopeptidase domain 10	within coordinates
Rr201557	regulatory region 201557	within coordinates
Rr201558	regulatory region 201558	622 bp proximal
Rr201559	regulatory region 201559	1422 bp proximal
Rr210505	regulatory region 210505	1822 bp proximal
Tssr85932	transcription start site region 85932	213 bp upstream