rs33688632 SNP Detail

Summary

• ID
  rs33688632
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:153472712 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  GTTGGGAATT GAACTCAGGA CCTCTGGAAG AGCAGTCAGT GCTTTTAACC ACTGAACCAT
  CTCTCCAGTC CGCACCCCCT TGCCCCAACC TTTGTACTTT TTAAGTTCAC TTAAATTGAT
  TTATTTCATC ACTGGAGAAA ACCTATCAAC AAATATTGTT TATTTGAACA AATAAGTGAA
  ATTCAGCGAG GCATGGTAGT ACACTCCTGA AAACCTCTCA CTGGGGCCTC AGAGACACTG
  GCAAGTTCCA GGCTACCTGG ACCACAGAGT GAGACCTTAC ATCCAGGAAC AAATAAACCA
  R
  TCCCCAGCAG AGAGAATGAG GCAGGAGAAT CACAAACTTG TAGTCTAGGC TACATGGCTA
  AATTATTTAT TTATTTATTT ATTTATTTAT TTATTTATTA AAGAGCTGAC TGAGCCTGTT
  GGCACAGGTA TATAAATTCA GGTCCTCAGG AGGTTGAGGA AGGAGGATTA TAAATTCAAG
  GCCAGACTGA GCAAATTATT GAGAATGGGA CTCAAACAAG GCCAGGCATA ATGAATGGTA
  CACGCCTAGA ATCCTAGCCT TGGAAGGCAG AGTGGAGGAT GGTTTTTAGT TCCATACCAG
                                                                   
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45308652	mCV23862286	ABI	CRAMUS_MOUSE	f	SNP	G	G	A	G
ss147999414	ENSMUSSNP5307190	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G		G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs33688632					SNP	G	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:153472712 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Commd7	COMM domain containing 7			Intron
				Noncoding-Transcript-Variant
Cpgi12491	CpG island 12491			1506 bp proximal
Rr567709	regulatory region 567709			336 bp distal
Rr567710	regulatory region 567710			1938 bp proximal
Tssr26915	transcription start site region 26915			1887 bp downstream
Tssr26916	transcription start site region 26916			1983 bp downstream