rs33689613 SNP Detail

Summary

• ID
  rs33689613
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:84374564 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GGAAAACACA GACAGGGATT GAGCTGGAAA GACACATAGA
  TGGAGGAAAA AAAAGAAAAG ATGGATGGAG AAAAAGAAAA AAGTCAGAGC ATCCAGTGCG
  Y
  CTGCACTCAG GCAGACAAGG CCAGGCAGAG GTTGCCGGCA GAAGACACGG AGGCCCACGG
  TGGCAGAAGA CGCTGAATCG CCCTCTGTTC TCCGAGCCG                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39566389	mCV23107700	ABI	CRAMUS_MOUSE	f	SNP	T	T	T	C
ss146129398	ENSMUSSNP4968249	ENSEMBL	ENSEMBL_Sanger	f	SNP		T		C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs33689613					SNP	T	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:84374564 () rs orientation: forward

Symbol	Name	Function Class
Cpgi9563	CpG island 9563	within coordinates
Gm35551	predicted gene, 35551	within coordinates
Gm65795	predicted gene, 65795	42 bp downstream
Rr531970	regulatory region 531970	within coordinates