rs33691173 SNP Detail

Summary

• ID
  rs33691173
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:118173328 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTCTC ACCACACCAT GATAGCTGGC
  K
  CTTTCTGCCT CCTCCTTCAG ATGAG                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss46306417	mCV22575009	ABI	CRAMUS_MOUSE	f	SNP		G	T
ss61231093	NES16848765	PERLEGEN	MM_PANEL2	f	SNP	G		T	T	G	T	G	T	G		G	T	G	G		G
ss137041354	ENSMUSSNP5437357	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	T
ss323216534	CHEV_9_118253378	CHEVERUD	SCREENING_POP	f	SNP										T					G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs33691173					SNP	G	G	T	T	G	T	G	T	G	T	G	T	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61231093	NES16848765	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:118173328 () rs orientation: forward

Symbol	Name	Function Class
Gm33088	predicted gene, 33088	within coordinates